Estimating sample size for transmission linkage from the false discovery rate3 years ago
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Estimating the probability of detecting a variant3 years ago
Variant detection | Variant prevalence | Other sampling scenarios
Estimating bias in observed variant prevalence3 years ago
Sample size calculations
Estimating the linkage false discovery rate from sample size3 years ago
Important Note
Estimating the probability of detecting a variant3 years ago
Variant prevalence
Estimating the sample size needed for variant monitoring3 years ago
Variant detection | Variant prevalence | Other sampling scenarios
Estimating the sample size needed for variant monitoring3 years ago
Variant detection | Variant prevalence | Other sampling scenarios
Estimating the sensitivity and specificity of a linkage criteria3 years ago
1. The mutation rate of the pathogen | 2. The distribution of generations between cases
Illustrative examples for evaluating transmission linkage3 years ago
Calculating sensitivity and specificity for an Ebola-like pathogen | Optimal values for an Ebola-like pathogen | Calculating sensitivity and specificity for a faster-spreading, slower mutating pathogen | Optimal values for a faster-spreading, slower mutating pathogen | Calculating the false discovery rate of genetic distance as a linkage criteria
Variant surveillance example3 years ago
Guidance for determining variant-specific parameters | The coefficient of detection ratio | Sample size calculations | Estimating the probability of detection
